68 posts tagged with "seqera cloud"

Feature updates and improvements​

Compute environments​

• Added a CloudInfo cloud instance type catalog and chip-selector filters specification.
• Added a description field to the Compute Environment V2 form.

Datasets​

• Exposed dataset file size in version API responses.

Pipelines​

• Added a Nextflow syntax parser v2 toggle.
• Added launch-time settings to the workflow configuration tab.

Studios​

• Added the compute environment name to the Studios row card.
• Added new API endpoints to fetch compatible compute environments for a Studio and update the compute environment on a Studio.
• Enabled updating the compute environment on a Studio.
• Resolved the user on SSH Studio connection attempts.

Bug fixes​

Data Explorer​

• Supported GCS pre-signed URLs with WIF credentials in Data Explorer.

Pipelines​

• Disabled the lineage launch toggle when lineage settings are not configured or when the compute environment does not support lineage.

Studios​

• Recovered legacy Studio event names in the usage query.
• Fell back to baseline Studio capabilities when the manifest is missing or the Studio version is not found in the manifest.

Feature updates and improvements​

Access control​

• Automatically disabled SSO on organization deletion.
• Enabled SSO domain verification.
• Skipped showcase workspace enrollment for free-tier users.

Compute environments​

• Added an export configuration option to the compute environment menu.

General​

• Added inactive scope styles and a settings breadcrumb trail.
• Aligned workspace settings routes and page titles.
• Updated workspace settings hub copy and added E2E selectors.
• Updated the labels page and modal type copy.

Bug fixes​

Compute environments​

• Fixed the compute environment edit form to skip name copy-rename when opened.

Data Explorer​

• Prevented bucket actions from becoming stuck in the CREATING state.

Studios​

• Fixed the redirection route for the Save as new Studio action.

Feature updates and improvements​

Compute environments​

• Added force-delete for stuck compute environments.
• Added an optional description field to compute environments.
• Added region name search to the Seqera Compute drop-down mwnu.

Pipelines​

• Added Nextflow lineage integration with indexing, API, and UI for browsing workflow lineage data.
• Added cron action source for scheduled pipeline launches.
• Added effectiveCpus and effectiveMemory helpers on Task.

Monitoring​

• Added GPU metrics.

General​

• Added automatic breadcrumb navigation in the page header.

Bug fixes​

Compute environments​

• Fixed AWS Batch child jobs to terminate on workflow cancellation.
• Added hpc6id to the NVMe instance families allowlist.

Data Explorer​

• Fixed 403 errors to surface properly when adding a data-link to a GCS bucket.
• Fixed text overflow in the Data Explorer modal.

Pipelines​

• Fixed cpuShares to vCPU conversion in Task.getEffectiveCpus.
• Fixed parameters being hidden in the launch form when hidden=false is set in nextflow_schema.json.

Access control​

• Fixed user metadata reading for name, surname, and organization fields.
• Fixed organization claim reading to use the namespaced claim instead of user_metadata.
• Classified DCR-registered OIDC clients as third-party.
• Updated the default refresh token expiration in OIDC.
• Fixed POST /metering to allow regular authenticated users.

Studios​

• Fixed the Studio form to enable buttons after valid input.
• Fixed the Mount data button to display on the Studios form.

General​

• Fixed copy icon position by pinning it to the top-right corner in code blocks.

Feature updates and improvements​

Access control​

• Added an Enterprise AI OAuth client parameter.
• Added the ability to edit workspaces from the admin panel.
• Added configurable access and refresh token expiration per client.
• Refined the copy in the SSO management section.

Compute environments​

• Added a compute instance types selector for AWS Cloud Scheduler.
• Aggregated CPU-hours in shares to preserve fractional allocations.

Pipelines​

• Added data lineage indexing.
• Enabled the AI debug button.

Platform API​

• Persisted requested CPU and memory values on WorkflowLoad.

Bug fixes​

Access control​

• Fixed frontend Cloud SSO feature handling.
• Updated the default refresh token expiration in OIDC.

Datasets​

• Fixed the dataset name maximum length in the frontend to match the backend.

Pipelines​

• Resolved a race condition in the Lineage section of task details.

Feature updates and improvements​

Compute environments​

• Replaced Azure Batch JobCleanupPolicy with DeleteTasks, DeleteJobs, and TerminateJob boolean options in the API.
• Added configurable head job CPUs and memory for Azure Batch.
• Renamed Instance type to Head instance type in AWS Cloud compute environments.

Pipelines​

• Added resourceAllocation to task data extension.
• Added bucket events to Actions.

Access control​

• Disabled collaborators for Cloud Pro SSO.
• Mapped Auth0 organization claim to user profile.
• Improved SSO collaborators and members error banners.

Bug fixes​

Pipelines​

• Fixed forbidden repository schema requests for shared pipelines.
• Fixed permission check for the browse button in the launch form.
• Added missing -X POST to the Action curl snippet.

General​

• Fixed resource labels value search in label suggestions.
• Added missing InputNormalizeDirective to the workspace form.

Feature updates and improvements​

Compute environments​

• Added support for separate head and worker pools in Azure Batch compute environments.
• Added the jobMaxWallClockTime option to Azure Batch compute environments.

Studios​

• Added the ability to edit a stopped Studio.

Access control​

• Decoupled the Auth0 Management API audience from the OIDC issuer to support custom Auth0 domains.

General​

• Introduced secondary tab navigation for organization and workspace pages.

Bug fixes​

Compute environments​

• Fixed Forge disposal failures being silently swallowed by propagating the underlying exceptions.
• Fixed job cancellation to be idempotent for already-canceled jobs.
• Fixed Azure Batch error handling to return an actionable message when the configured pool is missing.
• Fixed silently swallowed GCP Forge disposal failures by propagating the underlying exceptions.
• Fixed Azure Batch dual-pool mode to assign only the relevant managed identity to each pool.

Data explorer​

• Fixed IGV MIME type resolution in Data explorer.

Pipelines​

• Fixed the placement of the "compute environment not available" message in the pipeline form.

Studios​

• Fixed route URL mutation in the Studio resolver.

Feature updates and improvements​

Studios​

• Updated Studios micromamba to conda/micromamba:v2 and Wave to 1.33.0.

Compute environments​

• Added private VNet and subnet support for Azure Batch compute environments.
• Added separate Azure managed identities for head and compute jobs.
• Improved compute environment metering system with observability and retry logic.

Datasets​

• Added frontend implementation for dataset import from URL.
• Added preview support for linked datasets.

Data Explorer​

• Added Fusion symlink support in Data Explorer.
• Increased maximum data-link name length to 512 characters.

Bug fixes​

Compute environments​

• Fixed projectId on WIF LoggingOptions for log retrieval.
• Fixed WIF log retrieval to resolve project number to project name.
• Fixed WIF organization and workspace context propagation for log retrieval and data links.

Pipelines​

• Fixed parallel requests to pipeline info in launch form.

Datasets​

• Fixed dataset name field to apply input normalization.
• Fixed column order preservation in dataset preview for TSV files.

Access control​

• Fixed handling of absent Auth0 organization context.

Feature updates and improvements​

Studios​

• Added Wave nameStrategy workspace setting for Studios.

Compute environments​

• Added Azure service principal credentials support.
• Added Workload Identity Federation support for Google Batch compute environments.
• Added Entra credentials for Azure Batch Forge and Fusion v2.
• Added resource labels as metadata on Azure Batch jobs.
• Added support for multiple machine types in Google Batch compute environments.

Pipelines​

• Added Nextflow CLI as a static OIDC client.

Datasets​

• Added URL redirection logic to dataset file endpoint.

Data Explorer​

• Added extensible view mode selection for JSON files.
• Added open in new tab support for all files.

Monitoring​

• Updated database model to include target resource name.

General​

• Applied new email design to all email templates.
• Updated copy in delete workspace confirmation modal.
• Removed unused Containers page.
• Upgraded to Angular 21.

Bug fixes​

Studios​

• Fixed git config file validation when creating a Studio.

Compute environments​

• Fixed errors not propagated when a job is terminated asynchronously.
• Removed deprecated seqera.executor.predictionModel configuration.
• Removed terminateAsync default implementation.

Access control​

• Fixed Auth0 OAuth2 flow to handle ResponseClosedException.

Monitoring​

• Fixed credential audit events to include metadata.
• Fixed task logging to use populated taskId instead of empty id.

General​

• Fixed page-header actions, documentation links, and spacing.
• Fixed forbidden page icon size.

Feature updates and improvements​

Studios​

• Added IGV viewer for genomic data visualization.
• Added clipboard permissions to Studios iframe.
• Added support for previewing multitrack IGV JSON files.
• Improved Studios capabilities version check to normalize to major.minor granularity.

Compute environments​

• Added KMS encryption policy to AWS Cloud compute environments to support mounting KMS buckets in Studios.
• Added boot disk image selection for Google Batch compute environments.
• Added machine type selection for Google Batch compute environments.

Datasets​

• Added dataset link foundations.
• Added validate and link endpoints for dataset linking.

Pipelines​

• Improved pipeline launch form to scroll to first invalid control and highlight invalid parameters step.

General​

• Updated tabs component styles.
• Unified Seqera logos in compute environment and credential forms.

Bug fixes​

Compute environments​

• Fixed Google Batch secrets support.

Data Explorer​

• Fixed horizontal scrolling in Data Explorer file preview modal.

Access control​

• Fixed and clarified refresh token properties.
• Fixed permission required interceptor.
• Fixed JWTAuthRequired interceptor binding to prevent silent bypass.

General​

• Fixed nginx absolute redirects.

Feature updates and improvements​

Compute environments​

• Added human-readable messages for Google Batch exit codes.
• Added network tags support for Google Batch compute environments.

Data Explorer​

• Updated S3-compatible storage label in Data Explorer filter.

Access control​

• Moved edit button to organization details card.
• Improved welcome email UI.
• Updated authentication error page background.

General​

• Added navigation side-nav component for in-page navigation.
• Added expandable-text component to design system.

Bug fixes​

Studios​

• Fixed Studios expiry check to include stopping Studios.

Pipelines​

• Fixed tower.launch.params.maxSize to be passed to the frontend and used in validators.
• Fixed database migration by removing DEFAULT constraint on LONGTEXT column in tw_task_data_ext.

General​

• Fixed vertical alignment of checkboxes in table select column.
• Fixed table checkbox positioning.